Assessment of intermolecular interaction of mefenamic acid (Form II) in acetone and dimethylformamide (DMF) solution using molecular modelling technique

Authors

  • Nur Syazwina Mohd Aizuddin
    • Muhammad Syahir Syazwan Supian
      • Nurshahzanani Shahrir
        • Nornizar Anuar

          DOI:

          https://doi.org/10.24191/mjcet.v6i2.22809

          Keywords:

          Crystallisation, Morphology, Crystal surface, Binding energy, Non-bonded

          Abstract

          Solvent plays an important role in the solute-solvent intermolecular interactions of crystal morphology to regulate the crystal shape. Therefore, this work aims to assess the role of functional groups of solvents on the preferential sites on mefenamic acid (Form II) crystal surfaces, namely {001}, {011}, and {010} using the computational molecular modelling interactions techniques. The crystal morphology was successfully predicted as a plate-like crystal morphology using the BFDH method, and the molecular interactions of solute-solvent were assessed using the surface-docking method via Biovia Materials Studio software. The solute and solvent interactions along with surfaces used in this study disclosed that the {001} surfaces had the most negative non-bonded energy, followed by the {010} and {011} surfaces, ranging from −2036 to −2994 kcal/mol. Meanwhile, the binding energy values of acetone on all facets of interest were stronger compared to the binding energy of DMF, which possessed the binding energy of only less than [Text Wrapping Break]−10 kcal/mol. Nevertheless, the results showed that acetone as a small molecule interacted most strongly with all facets of mefenamic acid (Form II) crystals because it could form stronger hydrogen bonds due to its ketone functional group, hence inhibited the growth of the mefenamic acid (Form II) crystal facets. 

          References

          Abdul Mudalip, S. K., Abu Bakar, M. R., Jamal, P., Adam, F., Che Man, R., Sulaiman, S. Z., Mohd Arshad, Z. I., & Md Shaarani, S. (2018). Effects of solvents on polymorphism and shape of mefenamic acid crystals. MATEC Web of Conferences, 150. https://doi.org/10.1051/matecconf/20181500200

          Anuar, N., Yusop, S.N., & Roberts, K.J. (2022) Crystallisation of organic materials from the solution phase: A molecular, synthonic, and crystallographic perspective. Crystallography Reviews, 28 (2–3), 97–215. https://doi.org/10.1080/0889311X.2022.2123916.

          Chen, F., Zhou, T., Li, J., Wang, X., Cao, D., Wang, J., & Yang, Z. (2019). Crystal morphology of dihydroxylammonium 5,5′-bistetrazole-1,1′-diolate (TKX-50) under solvents system with different polarity using molecular dynamics. Computational Materials Science, 168, 48–57. https://doi.org/10.1016/j.commatsci.2019.05.060

          Cui, P., Yin, Q., Zhang, S., Cheng, X., Dai, J., Zhang, Z., Zhou, L., & Xie, C. (2020). The effect of solvents on crystal morphology of sucralose: Experiments and molecular dynamics simulation studies. Journal of Crystal Growth, 532, 125398. https://doi.org/10.1016/j.jcrysgro.2019.125398

          Docherty, R., Clydesdale, G., Roberts, K. J., & Bennema, P. (1991). Application of Bravais-Friedel-Donnay-Harker, attachment energy and Ising models to predicting and understanding the morphology of molecular crystals. Journal of Physics D: Applied Physics, 24(2), 89–99. https://doi.org/10.1088/0022-3727/24/2/001

          Fomin, E., & Alemasov, N. (2009). Implementation of a non-bonded interaction calculation algorithm for the cell architecture. Lecture Notes in Computer Science, 399–405. https://doi.org/10.1007/978-3-642-03275-2_39

          Gao, Z., Rohani, S., Gong, J., & Wang, J. (2017). Recent developments in the crystallisation process: Toward the pharmaceutical industry. Engineering, 3(3), 343–353. https://doi.org/10.1016/j.eng.2017.03.022

          Johansson, A., Kollman, P., Rothenberg, S., & McKelvey, J. (1974). Hydrogen bonding ability of the amide group. Journal of the American Chemical Society, 96(12), 3794–3800. https://doi.org/10.1021/ja00819a013

          Li, Z., Jia, S., Gao, Y., Wang, M., Hong, W., Gao, Z., & Gong, J. (2021). Solid-liquid equilibrium behavior and thermodynamic analysis of p-aminobenzoic acid using experimental measurement and molecular dynamic simulation. Journal of Molecular Liquids, 323, 114964. https://doi.org/10.1016/j.molliq.2020.114964

          National Center for Biotechnology Information (2023a). PubChem Compound Summary for CID 180, Acetone. Retrieved October 23, 2023, from https://pubchem.ncbi.nlm.nih.gov/compound/Acetone

          National Center for Biotechnology Information (2023b). PubChem Compound Summary for CID 17824068, DMF dimethylformamide. Retrieved October 23, 2023, from https://pubchem.ncbi.nlm.nih.gov/compound/DMF-dimethylformide

          Nugrahani, I., & Parwati, R. D. (2021). Challenges and progress in nonsteroidal anti-inflammatory drugs co-crystal development. Molecules, 26(14), 4185. https://doi.org/10.3390/molecules26144185

          Orehek, J., Teslić, D., & Likozar, B. (2020). Continuous crystallisation processes in pharmaceutical manufacturing: A review. Organic Process Research & Development, 25(1), 16–42. https://doi.org/10.1021/acs.oprd.0c00398

          Panchagnula, R., Sundaramurthy, P., Pillai, O., Agrawal, S., & Raj, Y. A. (2004). Solid-state characterisation of mefenamic acid. Journal of Pharmaceutical Sciences, 93(4), 1019–1029. https://doi.org/10.1002/jps.20008

          Rosbottom, I., Ma, C. Y., Turner, T. D., O'Connell, R. A., Loughrey, J., Sadiq, G., Davey, R. J., & Roberts, K. J. (2017). Influence of solvent composition on the crystal morphology and structure of p-aminobenzoic acid crystallised from mixed ethanol and nitromethane solutions. Crystal Growth & Design, 17(8), 415. https://doi.org/10.1021/acs.cgd.7b00425

          Shahrir, N., Anuar, N., Muttalib, N.A.A., Yusop, S.N., Bakar, M.R.A., Adam, F., & Ibrahim, S.F. (2022). The role of solvent hydroxyl functional groups on the interaction energy and growth of Form I paracetamol crystal facets. Organic Process Research & Development, 26(12), 3226-3235. https://doi.org/10.1021/acs.oprd.2c00151

          Shahrir, N., Anuar, N., Yusop, S.N., Zaki, H.M., & Tominaga, Y. (2023). Influence of polar protic solvents on urea morphology : A combination of experimental and molecular modeling. Crystal Growth & Design, 23(6), 4240–4254. https://doi.org/10.1021/acs.cgd.3c00060

          SeethaLekshmi, S., & Guru Row, T. N. (2012). Conformational polymorphism in a non-steroidal anti- inflammatory drug, mefenamic acid. Crystal Growth & Design, 12(8), 4283–4289. https://doi.org/10.1021/cg300812v

          Shibata, M., & Kuntzleman, T. S. (2009). Intermolecular interactions: dipole–dipole, dipole–induced dipole, and London dispersion forces. Journal of Chemical Education, 86(12), 1469. https://doi.org/10.1021/ed086p1469.1

          Yan, Y., Li, A., Si, Z., & Zhang, X. (2020). Solubility measurement, correlation, and molecular simulation of dabigatran etexilate mesylate polymorphs in five mono-solvents. Journal of Molecular Liquids, 314, 113676. https://doi.org/10.1016/j.molliq.2020.113676

          Zhou, J., Jiao, Z., Zhang, J., & Zhong, Z. (2021). Nanoindentation of single-crystal and polycrystalline yttria-stabilised zirconia: A comparative study by experiments and molecular dynamics simulations. Journal of Alloys and Compounds, 878, 160336. https://doi.org/10.1016/j.jallcom.2021.160336

          Published

          2024-06-23

          How to Cite

          Assessment of intermolecular interaction of mefenamic acid (Form II) in acetone and dimethylformamide (DMF) solution using molecular modelling technique. (2024). Malaysian Journal of Chemical Engineering and Technology, 6(2). https://doi.org/10.24191/mjcet.v6i2.22809

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